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Python Related Packages for Scientific Computing

VERSION 8  Click to view document history
Created on: May 13, 2009 10:07 AM by Jules Kouatchou - Last Modified:  Feb 25, 2014 10:42 AM by Jules Kouatchou

We listed here Python related packages that are installed on dali. We provide the version number and the installation location of each package. It is important to note that information on this page may change without any notice.

 

Name

Version

Brief Description

Location

Python

2.5.4

Dynamic object-oriented programming language

/usr/local/other/Python-2.5.4

numpy

1.3.0

Adds a fast and sophisticated array facility to Python

usr/local/other/Python-2.5.4/lib/python2.5/site-packages

ipython

0.9.1

Interactive and exploratory computing tool for Python

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

scipy

0.7.0

Scientific tools for Python

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

netcdf4-python


Python interface to the netCDF version 4 library

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

python imaging

1.1.6

Provides image processing functionality

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pylab


Numeric computation environment

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pygrads

1.1.2

Python interface to GrADS

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pyXML

0.8.4

Python interface to XML

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

matplotlib

0.98.5.2

Python 2D plotting library

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

matplotlib-tk



/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

basemap

0.99.4

matplotlib toolkit for plotting 2D data on maps in Python

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pyhdf

0.8.3

Python library providing access to HDF files

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pydap

2.1.4

Python library implementing the Data Access Protocol

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pynetcdf

0.7

Python library providing access to netCDF files


pycairo

1.4.0

Set of Python bindings for the cairo graphics library


pyOpenSSL

0.9

Python interface to the OpenSSL library

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

wxPython

2.8.9.2

GUI toolkit for Python

/usr/local/other/wxPython/2.8.9.2

mpi4py

1.0.0

Set of Python bindings for MPI

/usr/local/other/mpi4py/1.0.0

Tcl/Tk

8.5.7.0.290198

Tool Command Language and Graphical user interface

/usr/local/other/ActiveTcl/8.5.7.0.290198

vtk

5.4.0

Visualization ToolKit for 3D computer graphics, image processing, etc.


Networkx

0.37

Python package for complex networks

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

ffnet

0.6.1

Neural network training solution for Python

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

pyML

0.7.2

Interactive object oriented framework for machine learning

/usr/local/other/Python-2.5.4/lib/python2.5/site-packages

ccplot1.42A command line application that reads CloudSat, CALISO and Aqua MODIS HDF files, and produces plots of profile, layer and swath products./usr/local/other/Python-2.5.4/bin

 

We use the following setting to install the most of the above packages:

 

setenv CC gcc
setenv CXX g++
setenv F77 gfortran
module load lib/mkl-10.1.2.024
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